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INDEXED
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SequenceFile
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IGVFFI1383OCWM
IGVFFI1383OCWM
released
validated
Json view
File Set
IGVFDS4094SFYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8338
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8338_R2
md5sum
bf504ecdc769d35125e32c0b85cc000c
Content MD5sum
9bceb6f45ec70e291d6ed64afcc9d63c
File Size
1.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2224_L8_SS-PKR-528_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8338
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
28909375
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8139LSOK
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 528)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5517WBPK
yaml
seqspec
seqspec of IGVFFI8925AFIB, IGVFFI1383OCWM
Jason Buenrostro, Broad
1.2 KB
validated