IGVFFI1373WZRV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7496YSSL(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP026_G2_P076_L005_R2

md5sum

fcd022052be5d2c5a7cdb294c5c8313b

Content MD5sum

111c2eb3081d5f3c50e7b52414ca8a39

File Size

13 GB

Submitted File Name

Multiome_RNA_RP026_G2_L002_P076_S42_L005_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

184805220

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9641MJVP

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples