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IGVFFI1336KPGX

released
validated
File Set
IGVFDS7761MAGD(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
b98d8cb842ebb097318983bd5b63d2ff
Content MD5sum
d2b9962ce38b61a1c96699d48fc4e33c
File Size
22 GB
Submitted File Name
igvf_005/nextseq2/igvf_005_B03_E_next_N2_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC3V7HHV
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
140
Read Count
279171459

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
233 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2668MCMX, IGVFFI1336KPGX
Ali Mortazavi, UCI
1.3 KB
validated