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IGVFFI1333PJNQ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8419ZMNL(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:donor1_Bcell_multiome_GEX_NGS_Day5_6_L002_R1_corrected
md5sum
ab5eb05afa536f925659d416b3ed3c99
Content MD5sum
3cf1730db380bed05e528d3d6c73133d
File Size
1.3 GB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/fastqs/scRNA/NP002_03_120222_Singh_Multiome_GEX_LAF4451A13_S18_L002_R1_001.fastq.gz
Checkfiles Version
v19
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
59066429

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days

Files Derived From This File

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.8 GB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
447 MB
validated