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SequenceFile
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IGVFFI1333MMYV
IGVFFI1333MMYV
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1879IAKX
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 384
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX3-SC2_snATAC_S0_R2
md5sum
b5e310329f5b1c9b8b46d8d66c99c9d0
Content MD5sum
5988ff56f02f2c355679a9249d71d4d2
File Size
3.5 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX3-SC2/AHM2T2DSX2/XHLT1-POOL-XX3-SC2-ATAC_S10_L003_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
384
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
207806453
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4434DRKC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 53.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples