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INDEXED
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SequenceFile
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IGVFFI1330XNXA
IGVFFI1330XNXA
released
validated
Json view
File Set
IGVFDS0635LULZ
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day16_L7_R1
md5sum
172ee0e04dd172f049d74a8332c90af6
Content MD5sum
e6ac3655bd3e7cac0d2445e9d14d5a17
File Size
2.6 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C39D16-Pos1-A12_S11_L007_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
147.7
Read Count
38828086
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9563MBMI
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 16 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA