Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1304YZRD
IGVFFI1304YZRD
released
validated
Json view
File Set
IGVFDS3661QZGP
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P014-R2
md5sum
d81bac17d1eb65ddd6847ef1915b49c6
Content MD5sum
37e771328fbcb40e7c86047aed787785
File Size
9.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool14.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
57593977
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4499JOWS
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
8.5 GB
validated
IGVFFI7964TXYL
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
8.2 GB
validated