IGVFFI1301DJCO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0065BALX(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:Jurkat_Stim-IL2RA_prom-BioRep2-FFRep3-BinC-PCRRep4_R1

md5sum

57d48b7705323565ad6ef38b2c2db141

Content MD5sum

2bc2e00c211d63199868a4c7ec3dc0fd

File Size

6.2 MB

Submitted File Name

Jurkat_Stim-IL2RA_prom-BioRep2-FFRep3-PCRRep4-BinC_S95_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Illumina Read Type

Index

TGTAACTC:TTGT

Average Read Length

150

Read Count

211641

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM7206IJBO

InVitroSystem

Jurkat

Jurkat cell line, male, Homo sapiens (sorting details: FACS bin for 51-75% expression of IL2RA) treated with 100 ng/mL phorbol 13-acetate 12-myristate for 24 hours, 5 μg/mL T-cell surface glycoprotein CD3 gamma chain for 24 hours, modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library