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INDEXED
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SequenceFile
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IGVFFI1298ATWS
IGVFFI1298ATWS
released
validated
Json view
File Set
IGVFDS3373WDMA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4036
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4036_R1
md5sum
591ae3fb994f4016701e983b35d9b863
Content MD5sum
eda6a0eba6d88278a7177fe448c376fa
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-730_L2_SS-PKR-180_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4036
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
21146781
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6804CCZD
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8357WHWU
yaml
seqspec
seqspec of IGVFFI1298ATWS, IGVFFI6178PVRA, IGVFFI3961KFQT
Jason Buenrostro, Broad
1.3 KB
validated