IGVFFI1286GWLQ

released
validated
File Set
IGVFDS7205UOTV(unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep2-FFrep2-FACS_Input-PCRrep1_R2
md5sum
3f6aeb6ad9c81c9feb4c928a8094122c
Content MD5sum
10a0fd6dc71406fcb535cd0d36697285
File Size
75 MB
Submitted File Name
220228pPPIF-FFSample-8-D21-pPPIF-Amp-pPPIF-2-2-1-BinAll_R2_001.fastq.gz
Checkfiles Version
Attribution

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R2
Index
GACCTAAC:TGAC
Average Read Length
150
Read Count
1901643

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transduced (lentivirus) with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
variant effects
hg19 variant effects
Jesse Engreitz, Stanford
2.4 KB
validated