IGVFFI1280VSTH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1302XQWQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G8_P052_L004_R1

md5sum

a60cf366c7df279db86fdcbbd235ee67

Content MD5sum

b9f37ee7fd14a6d1dd29c7c15eb1bdb3

File Size

3.5 GB

Submitted File Name

Multiome_RNA_RP002_G8_L008_P052_S16_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

179394268

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7029TFEQ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples