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INDEXED
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SequenceFile
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IGVFFI1254YUWX
IGVFFI1254YUWX
released
validated
Json view
File Set
IGVFDS8980IROP
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P013-R1
md5sum
48c2c2748764250d089bf974da4bd6f7
Content MD5sum
b872e0632a707a4b4b092caf9e0b6218
File Size
6.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool13.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
41979783
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2049ZLGM
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.8 GB
validated
IGVFFI9915DZYL
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.5 GB
validated