IGVFFI1238FADY

released
validated
File Set
IGVFDS6748EEVW(CRISPR HiCAR integrating a non-targeting guide (sgRNA) library)
Summary
R1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-control-1umET1-ipsc-cm-targeted-hicar-rep2-R1
md5sum
8dbc22739a4dcc1a813992443ad1e793
Content MD5sum
6af215c895bef131ff67d60ad768d0df
File Size
1.2 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_human/crispra_hicar_human_fastq/H_vp64_r2_NT_3_1uMET1_ds.93b658e4765c49439a23ab618727f7eb/H_vp64_r2_NT_3_1uMET1_S7_L001_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
23652913

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens treated with 1 μM Endothelin-1 for 3 days, transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
43 MB
validated

Attribution