IGVFFI1222WLWM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3628MXUK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G1_P060_L006_I1

md5sum

213903b4c8df644e0ef0323e87c9ef98

Content MD5sum

ec05ebec9bfd9341a911082bf88a0f61

File Size

295 MB

Submitted File Name

Multiome_RNA_RP011_G1_L009_P060_S25_L006_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

43593652

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4137SEKT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples