IGVFFI1222KZLK

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI1222KZLK/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI1222KZLK",
    "aliases": [
        "jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-FACS_Input-PCRrep3_R2"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI1222KZLK](/sequence-files/IGVFFI1222KZLK/) has in progress subobject auxiliary set [IGVFDS1697BVWV](/auxiliary-sets/IGVFDS1697BVWV/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI1222KZLK/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "c057a6507cf407a3a7ad220818ee8494",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-05T20:38:19.637879+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS1697BVWV/",
    "file_size": 5776771,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI1222KZLK/@@download/IGVFFI1222KZLK.fastq.gz",
    "illumina_read_type": "R2",
    "index": "CATAGCGA:TTGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "ea84f3ab6a4c0a22201d6dac1aa0bb61",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 154616,
    "release_timestamp": "2023-12-21T00:09:31.462971+00:00",
    "s3_uri": "s3://igvf-files/2023/12/05/46cfef2e-9168-4fd1-9e39-f395b2b7a9e3/IGVFFI1222KZLK.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrep3-BinAll-PCRrep3_S405_R2_001.fastq.gz",
    "summary": "R2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "46cfef2e-9168-4fd1-9e39-f395b2b7a9e3"
}