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INDEXED
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SequenceFile
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IGVFFI1216NFJG
IGVFFI1216NFJG
released
validated
Json view
File Set
IGVFDS6532YIGO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8980
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8980_R1
md5sum
b1a7882c1e1debc659dfd6b6e7eddbe4
Content MD5sum
2e2e617a7ec0c7c1c0f98087600f0d39
File Size
752 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2330_L6_SS-PKR-188_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8980
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
16673966
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1144ESXR
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 188)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6539BOLT
yaml
seqspec
seqspec of IGVFFI1216NFJG, IGVFFI5125EZRW, IGVFFI5927XWPQ
Jason Buenrostro, Broad
1.3 KB
validated