Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1199GCIN
IGVFFI1199GCIN
released
validated
Json view
File Set
IGVFDS9866LFTQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3807
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3807_R1
md5sum
d063dc011c0fb61e11484d1d28798157
Content MD5sum
a161b922f64951eab493b17b73348018
File Size
562 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1535_L1_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3807
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
11601558
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2622TPEI
yaml
seqspec
seqspec of IGVFFI1199GCIN, IGVFFI4949HHAZ
Jason Buenrostro, Broad
1.3 KB
validated