IGVFFI1178TXIF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2585XWPY(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G5_P056_L007_I1

md5sum

fd32f4935bd88d5a439bb6662ebf39e7

Content MD5sum

79d3b31b5b673d9f775c066b67b4269b

File Size

403 MB

Submitted File Name

Multiome_RNA_RP007_G5_L005_P056_S92_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69569764

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2276WIKG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples