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IGVFFI1166IUTD

released
validated
File Set
IGVFDS1873JMKU(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2488
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2488_R1
buenrostro-bernstein:SS-LS_2488_R1
md5sum
1be92a3bc9f3397f0f4bdb847b2dac9d
Content MD5sum
fc222f517d7b16918ea135a65651321f
File Size
722 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-60_L3_SS-PKR-5_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2488
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
36093423

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (37 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad