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INDEXED
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SequenceFile
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IGVFFI1155QLOI
IGVFFI1155QLOI
released
validated
Json view
File Set
IGVFDS4922GNDX
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day7_L6_R2
md5sum
f6103e20a19a6e55d8f6f8fb6cedfc22
Content MD5sum
437a4cf1981b46b57f8d3525f9eeea1b
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl46/20230918-3C39D7-Pos1-A12_S8_L006_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
149.74
Read Count
41724455
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2359RGPU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA