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INDEXED
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SequenceFile
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IGVFFI1155ESYJ
IGVFFI1155ESYJ
released
validated
Json view
File Set
IGVFDS7929XOMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8504
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8504_R1
md5sum
0234ed7f13f93668192103cc241e21f8
Content MD5sum
3f2dffceae938cc20c94d5cb1bf84787
File Size
858 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2334_L1_SS-PKR-199_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8504
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
19359041
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4768GZVP
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5265TBLK
yaml
seqspec
seqspec of IGVFFI1155ESYJ, IGVFFI4171QBYC, IGVFFI7485DCRW
Jason Buenrostro, Broad
1.3 KB
validated