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INDEXED
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IGVFFI1153QWWI
IGVFFI1153QWWI
released
validated
Json view
File Set
IGVFDS4314DDJA
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
e7fd2d4ea79dc75023e98c870cc43f61
Content MD5sum
7f3ed7929a0147920cd694243ce05324
File Size
5.7 GB
Submitted File Name
igvf_004/nova1/igvf_004_B14_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
HTH33DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
160485507
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5739IEPT
MultiplexedSample
heart
,
liver
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7172UDTQ
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3070DKOL
yaml
seqspec
seqspec of IGVFFI9486AODK, IGVFFI1153QWWI
Ali Mortazavi, UCI
1.4 KB
validated