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INDEXED
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SequenceFile
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IGVFFI1148TRKL
IGVFFI1148TRKL
released
validated
Json view
File Set
IGVFDS7344QYUY
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8683
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8683_R1
md5sum
8682805d0fb8a759c7b7a53ec4656052
Content MD5sum
595869e327d9a12d2dc2556b2cce88d0
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2321_L3_SS-PKR-184_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8683
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
31133590
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3417JSMJ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 184)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7425JACN
yaml
seqspec
seqspec of IGVFFI1148TRKL, IGVFFI0989TYTT, IGVFFI7899ZRJH
Jason Buenrostro, Broad
1.3 KB
validated