IGVFFI1124XHWL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3125EBYU(single-nucleus ATAC-seq (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X048_G2_P049_L001_I1

md5sum

bc9f012656044842b6ce281d2c0a9dbf

Content MD5sum

3e6db5f90d2610f56d3aa0b9495d8922

File Size

1.7 GB

Submitted File Name

Multiome_ATAC_X048_G2_L002_P049_S6_L001_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

214427601

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4666GHWA

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples