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IGVFFI1118JKQS

released
validated
File Set
IGVFDS9711DZFS(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS15-prim-5K-ATAC.R1.fastq.gz
md5sum
b44116f0a520e10ff44ddec3c9cd3f5e
Content MD5sum
60daa2b27fc7544d6f16462232a50d5e
File Size
2.4 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS15-prim-5K-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS15-prim-5k_P1.68
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
90.45
Read Count
46267540

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1118JKQS, IGVFFI5679HQIA, IGVFFI7761XEQA
Jason Buenrostro, Broad
1.2 KB
validated