IGVFFI1096ZJQD

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5717NYNW(single-nucleus ATAC-seq (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP023_G4_P067_L001_R1

md5sum

ce29c8687061c727123db86e47aa9467

Content MD5sum

038516ed03bd36073fde6ecc165cedd1

File Size

2.0 GB

Submitted File Name

Multiome_ATAC_RP023_G4_L004_P067_S16_L001_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HC3LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

63949943

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9853HKYG

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples