IGVFFI1090NXAM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2614JDXX(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X048_G5_P050_L002_R1

md5sum

0bb50a98affda0d17f654b7537074370

Content MD5sum

440276e8d570385332e159dd2a64c600

File Size

23 GB

Submitted File Name

Multiome_RNA_X048_G5_L005_P050_S21_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H7VW3DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

356157250

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6138EUGH

MultiplexedSample

posterior cingulate gyrus, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 93 years) substantia nigra tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples