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SequenceFile
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IGVFFI1085WDCQ
IGVFFI1085WDCQ
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8614EBXF
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP033_G8_P080_L006_I1
md5sum
596d1462ec1bb3c786e0074eb48d2dae
Content MD5sum
315f508f227b9e61b81b316c5b08d9c0
File Size
1.0 GB
Submitted File Name
Multiome_RNA_RP033_G8_L008_P080_S60_L006_I1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
19NHCA4LE
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
I1
Average Read Length
10
Read Count
147435486
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM5427LJNG
MultiplexedSample
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples