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SequenceFile
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IGVFFI1085DIJP
IGVFFI1085DIJP
released
validated
Json view
File Set
IGVFDS4920EJIH
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3919
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3919_R1
md5sum
00a01c7d260942846ae974ddfdd0b8c8
Content MD5sum
96cff971c124d87e979626f0a09f6eae
File Size
1.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-778_L5_SS-PKR-176_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3919
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
21921660
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8689KFPE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4997HOXI
yaml
seqspec
seqspec of IGVFFI1085DIJP, IGVFFI1399HWDT, IGVFFI0273NLXV
Jason Buenrostro, Broad
1.3 KB
validated