Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1056SNKD
IGVFFI1056SNKD
released
validated
Json view
File Set
IGVFDS6909NSFT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7333
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7333_R1
md5sum
17344bf7403b74819f1cfc698ea4e2c8
Content MD5sum
fe8f9fb3c4e3198ffffac0b12a0ec0a6
File Size
7.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1910_L5_SS-PKR-433_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7333
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
187565660
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9503WHHQ
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 433)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7549SZFK
yaml
seqspec
seqspec of IGVFFI1056SNKD, IGVFFI2741WDZJ
Jason Buenrostro, Broad
1.3 KB
validated