IGVFFI1051BZRQ

released
validated
File Set
IGVFDS0282GEHF(gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:auxiliary_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S4_R2
md5sum
fc8ebe07447a71fddb957926d8fdfad2
Content MD5sum
b49c233a8e9b3aa2373b91812b810194
File Size
320 MB
Submitted File Name
/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L361_S2_L004_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Lane
4
Illumina Read Type
R2
Average Read Length
90
Read Count
6950199

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9836SEKG, IGVFFI6689KNLG, IGVFFI1051BZRQ
Jesse Engreitz, Stanford
1.2 KB
validated

Attribution