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IGVFFI1045UARS

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5867EPVA(scRNA-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20240212_GEX_NGS_2_LAF7052A9_L001_R1
md5sum
3f78042c3ae210b77b08b2d403a1e490
Content MD5sum
a52df6f25045c153edaedc65ea8dd764
File Size
7.6 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20240318_PerturbSeq_2/Singh_021224_2_Pool_5Pv2_GEX_LAF7052A9_S2_L001_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
372765866

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days; ... and 12 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
1.2 GB
validated