Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1045DJZR
IGVFFI1045DJZR
released
validated
Json view
File Set
IGVFDS1387CFOT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1757
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1757_R1
buenrostro-bernstein:SS-LS_1757_R1
md5sum
79bfa40e03e796880c0043db780a759f
Content MD5sum
37da6b0d14ce5c7d9b2c1aefcede70cd
File Size
4.2 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1158_L4_SS-PKR-8_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1757
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
127
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4912FPBQ
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad