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IGVFFI1018OOCL

released
validated
File Set
IGVFDS0463BASV(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS15-prim-20K-ATAC.R1.fastq.gz
md5sum
ea9d5febb137e937c125aaa4a6392ded
Content MD5sum
9b7cb8cb1fbe0aa2ccd6176f5a449c0a
File Size
11 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS15-prim-20K-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS15-prim-20k_P1.70
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
88.87
Read Count
210606255

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1018OOCL, IGVFFI0054RGNX, IGVFFI3924LWOL
Jason Buenrostro, Broad
1.2 KB
validated