Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1008URLK
IGVFFI1008URLK
released
validated
Json view
File Set
IGVFDS4734AIKT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1713
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1713_R1
buenrostro-bernstein:SS-LS_1713_R1
md5sum
e2a23a921e35c716915ec386210128d3
Content MD5sum
43580ac1c14e7dc2c49e2d85eb28a458
File Size
2.5 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1114_L4_SS-PKR-5_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1713
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
59
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0894LXUU
PrimaryCell
bone marrow
Homo sapiens (female, 19 years) bone marrow cell (cellular sub pool: SS-PKR 5)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated