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IGVFFI1003AFXX

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5526TAEF(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 554
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX8-SC3_snATAC_S2_R3
md5sum
d9014b4bc3e5c4a382814e3e21d69de7
Content MD5sum
1d938c2d518151d2e417b02a9d075538
File Size
8.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX8-SC3/BH2VM7DSX3/XHLT1-POOL-XX8-SC3-ATAC_S15_L002_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
554
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
172882534

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 26.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 26.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF