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IGVFFI1001KYTA

released
validated
File Set
IGVFDS8556WPGM(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 238
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2034_R1
bradley-bernstein:SS-LS_238_R1
buenrostro-bernstein:SS-LS_2034_R1
buenrostro-bernstein:SS-LS_238_R1
md5sum
539ed96fa883675794d1201980e9ea2d
Content MD5sum
d491daad2927716703efdeb53b5bdef9
File Size
635 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-159_L2_SS-PKR-130_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
238
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
22884543

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1001KYTA, IGVFFI4364SHWE
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad