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INDEXED
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SequenceFile
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IGVFFI0992VCWH
IGVFFI0992VCWH
released
validated
Json view
File Set
IGVFDS5192VPKQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 63
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1981_R2
bradley-bernstein:SS-LS_63_R2
buenrostro-bernstein:SS-LS_1981_R2
buenrostro-bernstein:SS-LS_63_R2
md5sum
a716bbeb8c4b7b523790a79392195145
Content MD5sum
acc2f0e7b0f1af4043463d90fc48ca01
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-134_L1_SS-PKR-129_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
63
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
21245391
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7946BPBO
yaml
seqspec
seqspec of IGVFFI6975THFK, IGVFFI0992VCWH
Jason Buenrostro, Broad
1.2 KB
validated