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IGVFFI0989SLSC

released
validated
File Set
IGVFDS4191KCRM(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
1dec2cd1819496e8e0517aaf27d1800c
Content MD5sum
8bc5500a38ef2b85c5cca0dbbbe7f4e0
File Size
13 GB
Submitted File Name
igvf_011/nova2/igvf_011_B09_D_nova_N2_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Flowcell ID
H7KYTDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
180753481

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7981OOJN, IGVFFI0989SLSC
Ali Mortazavi, UCI
1.3 KB
validated