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INDEXED
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SequenceFile
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IGVFFI0985PBIN
IGVFFI0985PBIN
released
validated
Json view
File Set
IGVFDS2660YHFN
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C29_day14_L2_R1
md5sum
d319247dee21c18062d09bbbea576cc7
Content MD5sum
299bebca62564b9a3382f58d0bbdaf8e
File Size
5.3 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C29D14-Pos1-B01_S13_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.93
Read Count
70874701
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9932FZKJ
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA