IGVFFI0983CKVR

released
validated
File Set
IGVFDS2385QENN(scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jay-shendure:CRISPRa_singlecell_iPSCneuron_VPH_sequence_exprs_10Xlane3_seqlane1_I1
External Resources
md5sum
acfac80ec4267efb13f3ab2ae942fa24
Content MD5sum
9383d568caaa2f8726cf8b14bb258418
File Size
747 MB
Submitted File Name
/net/shendure/vol10/www/content/members/CRISPRa_QTL_website/public/data/neuron_data/sequencing_data/cellranger_mkfastq_output/outs/fastq_path/AAAMCTVHV/exprs_3/exprs_3_S3_L001_I1_001.fastq.gz
Checkfiles Version

Sequencing Details

Sequencing Platform
Sequencing Run
1
Flowcell ID
AAAMCTVHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
I1
Average Read Length
10
Read Count
112645510

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane3), male, Homo sapiens modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library

Files Derived From This File

3 items
csv
differential gene expression quantifications
differential gene expression quantifications
Jay Shendure, UW
1.7 KB
validated
tar
filtered feature barcode matrix
cell by gene in filtered feature barcode matrix
Jay Shendure, UW
442 MB
validated
csv
differential gene expression quantifications
differential gene expression quantifications
Jay Shendure, UW
2.0 KB
validated

Attribution