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INDEXED
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SequenceFile
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IGVFFI0980UPVL
IGVFFI0980UPVL
released
validated
Json view
File Set
IGVFDS4606LBDI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8646
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8646_R1
md5sum
a421f83070cf303c1c6eac6cdcff8451
Content MD5sum
9436df4fe6f954f8ee8996adbac05835
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2284_L3_SS-PKR-177_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8646
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
29099078
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3303ZLKL
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4861PVQD
yaml
seqspec
seqspec of IGVFFI0980UPVL, IGVFFI1913JRIN, IGVFFI5828URSG
Jason Buenrostro, Broad
1.3 KB
validated