IGVFFI0978ELWU

{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI0978ELWU/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI0978ELWU",
    "aliases": [
        "jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-BioRep2-FFrep4-FACS_Input-PCRrep2_R2"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released sequence file [IGVFFI0978ELWU](/sequence-files/IGVFFI0978ELWU/) has in progress subobject auxiliary set [IGVFDS7015ZBQM](/auxiliary-sets/IGVFDS7015ZBQM/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/sequence-files/IGVFFI0978ELWU/"
            }
        ]
    },
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "dc3eae29987555f9841d7061e0b41cd3",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2023-12-13T14:53:01.984257+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS7015ZBQM/",
    "file_size": 11238146,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI0978ELWU/@@download/IGVFFI0978ELWU.fastq.gz",
    "illumina_read_type": "R2",
    "index": "AGGATCTA:TTGT",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 150,
    "md5sum": "7d82ede27c9d3e1512005724a0ab5b28",
    "mean_read_length": 150,
    "minimum_read_length": 150,
    "read_count": 240848,
    "release_timestamp": "2023-12-21T01:02:37.895868+00:00",
    "s3_uri": "s3://igvf-files/2023/12/13/91c65d43-4789-4e0f-9cc6-09bab098c3f1/IGVFFI0978ELWU.fastq.gz",
    "schema_version": "14",
    "seqspecs": [],
    "sequencing_platform": "/platform-terms/EFO_0008566/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
        "title": "Michael Montgomery"
    },
    "submitted_file_name": "230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep2-FFRep4_BinAll-PCRrep2_S400_R2_001.fastq.gz",
    "summary": "R2 reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "91c65d43-4789-4e0f-9cc6-09bab098c3f1"
}