IGVFFI0975YQSR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0058HQMM(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G4_P062_L007_R1

md5sum

8e1f3f511e521df3ea583f0e42f6f10e

Content MD5sum

f420c46f67f95c2b822fbb4428e97a1b

File Size

1.2 GB

Submitted File Name

Multiome_RNA_RP014_G4_L004_P062_S32_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62405295

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8048XYHR

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples