IGVFFI0953LUWG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7285VTAR(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X014_G8_P013_L001_R2

md5sum

ab61326d9762acb77338e849c9fb8872

Content MD5sum

4e998c45dec5781c7d0d5033287fe65d

File Size

4.2 GB

Submitted File Name

Multiome_ATAC_X014_G8_L008_P013_S6_L001_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

244143600

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7957UHUR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples