IGVFFI0920QAYV

released
validated
File Set
IGVFDS5989CMGV(CRISPR prime editing Variant-EFFECTS sorted on the expression of PPIF integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230523pPPIFEnformer-THP1-Amp_PPIF_promoter-BioRep1-FFrep4-BinD-PCRrep1_R2
md5sum
3a9dfabc6813c5cee8138de3105027dc
Content MD5sum
f591bb821806af9aaae8391066e78e2d
File Size
18 MB
Submitted File Name
230523pPPIFEnformerTHP1-THP1-PE-pPPIF_Enformer-Amp-pPPIF-BioRep1-FFRep4_BinD-PCRrep1_S181_R2_001.fastq.gz
Checkfiles Version

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
R2
Index
TTGAGCCT:GTCA
Average Read Length
150
Read Count
361760

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens (sorting details: FACS bin for 76-100% expression of PPIF) modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution