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INDEXED
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SequenceFile
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IGVFFI0899FVIN
IGVFFI0899FVIN
released
validated
Json view
File Set
IGVFDS1647SMVR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8388
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8388_R1
md5sum
006212c4e0334a356a29e5a77d267cfa
Content MD5sum
20e174c83a10cb7ce2e285c811db38b0
File Size
2.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2258_L5_SS-PKR-607_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8388
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
65747758
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0974PFBP
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 607)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5209XGRR
yaml
seqspec
seqspec of IGVFFI0899FVIN, IGVFFI0976SXNI
Jason Buenrostro, Broad
1.2 KB
validated