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IGVFFI0883WSZA

released
validated
File Set
IGVFDS1199VPTM(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1448
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1448_R1
buenrostro-bernstein:SS-LS_1448_R1
md5sum
fe184dd25d833d57f5db12d82c61afdd
Content MD5sum
45ba81e24a4fe54f9f747f6510ea280b
File Size
585 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1137_L1_SS-PKR-7_SS-V1-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1448
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
27987519

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 7), male, Homo sapiens (26 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad