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INDEXED
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SequenceFile
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IGVFFI0877MCVK
IGVFFI0877MCVK
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 7331
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7331_R2
md5sum
e99cc37bfa8993da5d905c7c119544b5
Content MD5sum
a91f0a01ed73e2816d6359eb1160a89a
File Size
10 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1913_L5_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7331
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
168345164
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0240SVTR
yaml
seqspec
seqspec of IGVFFI9543FOFD, IGVFFI0877MCVK
Jason Buenrostro, Broad
1.3 KB
validated