Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI0868DASK
IGVFFI0868DASK
released
validated
Json view
File Set
IGVFDS1815DBIG
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-dss04_prim_15k_1_RNA.barcode.fastq.gz
md5sum
44d1d256a5bcf8ec1c26b187b02c24c1
Content MD5sum
6368bdfba4a834154ac4d6e7330f6c5c
File Size
1.3 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/dss04_prim_15k_1_RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
60932283
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0332KRWE
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7884XHOJ
yaml
seqspec
seqspec of IGVFFI6386FNVB, IGVFFI7172AAUA, IGVFFI0868DASK
Jason Buenrostro, Broad
1.2 KB
validated